Cátia Pesquita

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Oliveira, D., and C. Pesquita, "Improving the interoperability of biomedical ontologies with compound alignments", Journal of biomedical semantics, vol. 9, no. 1: BioMed Central, pp. 1, 2018.
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Faria, D., C. Pesquita, I. Mott, C. Martins, F. M. Couto, and I. F. Cruz, "Tackling the challenges of matching biomedical ontologies", Journal of biomedical semantics, vol. 9, no. 1: BioMed Central, pp. 4, 2018.
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Cheatham, M., and C. Pesquita, "Semantic Data Integration", Handbook of Big Data Technologies: Springer, pp. 263–305, 2017.
Pesquita, C., "Semantic similarity in the gene ontology", The Gene Ontology Handbook: Springer, pp. 161–173, 2017.
Cheatham, M., I. F. Cruz, J. Euzenat, and C. Pesquita, "Special issue on ontology and linked data matching.", Semantic Web, vol. 8, no. 2, pp. 183–184, 2017.
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Faria, D., C. Pesquita, B. S. Balasubramani, C. Martins, J. Cardoso, H. Curado, F. M. Couto, and I. F. Cruz, "OAEI 2016 results of AML.", OM@ ISWC, pp. 138–145, 2016.
Bakhshandeh, M., C. Pesquita, and J. Borbinha, "An Ontological Matching Approach for Enterprise Architecture Model Analysis", International Conference on Business Information Systems: Springer, pp. 315–326, 2016.
Cardoso, J., M. Bakhshandeh, D. Faria, C. Pesquita, and J. Borbinha, "Ontology-Based Approach for Heterogeneity Analysis of EA Models", International Conference on Business Process Management: Springer, pp. 131–142, 2016.
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Dragisic, Z., V. Ivanova, P. Lambrix, D. Faria, E. Jiménez-Ruiz, and C. Pesquita, "User validation in ontology alignment", International Semantic Web Conference: Springer, pp. 200–217, 2016.
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Ivanova, V., P. Lambrix, S. Lohmann, and C. Pesquita, "VOILA! 2016: Proceedings of the 2nd International Workshop on Visualization and Interaction for Ontologies and Linked Data, Co-located with ISWC 2016, Kobe, Japan, October 17, 2016", 2nd International Workshop on Visualization and Interaction for Ontologies and Linked Data, Kobe, Japan, October 17: CEUR Workshop Proceedings, 2016.
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Ivanova, V., T. Kauppinen, S. Lohmann, S. Mazumdar, C. Pesquita, and K. Xu, "Proceedings of the International Workshop on Visualizations and User Interfaces for Knowledge Engineering and Linked Data Analytics", International Workshop on Visualizations and User Interfaces for Knowledge Engineering and Linked Data Analytics: CEUR Workshop Proceedings, 2014.
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Faria, D., C. Pesquita, E. Santos, M. Palmonari, I. F. Cruz, and F. Couto, "The agreementmakerlight ontology matching system", On the Move to Meaningful Internet Systems: OTM 2013 Conferences: Springer Berlin Heidelberg, pp. 527–541, 2013.
Faria, D., C. Pesquita, E. Santos, I. F. Cruz, and F. Couto, "AgreementMakerLight Results for OAEI 2013", Ontology Matching, pp. 101, 2013.
Faria, D., C. Pesquita, E. Santos, I. F. Cruz, and F. Couto, "AgreementMakerLight results for OAEI 2013.", OM, pp. 101–108, 2013.
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Pesquita, C., D. Faria, C. Stroe, E. Santos, I. F. Cruz, and F. Couto, "What's in a 'nym'? Synonyms in Biomedical Ontology Matching", The Semantic Web–ISWC 2013: Springer Berlin Heidelberg, pp. 526–541, 2013.
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Grego, T., C. Pesquita, H. Bastos, and F. Couto, "Chemical entity recognition and resolution to ChEBI", International Scholarly Research Notices, vol. 2012: Hindawi Publishing Corporation, 2012.
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Pesquita, C., and F. Couto, "Predicting the extension of biomedical ontologies", PLoS computational biology, vol. 8, no. 9: Public Library of Science, pp. e1002630, 2012.
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Bastos, H., B. Tavares, C. Pesquita, D. Faria, and F. Couto, "Application of Gene Ontology to gene identification", In Silico Tools for Gene Discovery: Humana Press, pp. 141–157, 2011.
Bastos, H., B. Tavares, C. Pesquita, D. Faria, and F. Couto, "Application of gene ontology to gene identification.", Methods in molecular biology (Clifton, NJ), vol. 760: Springer, pp. 141–157, 2011.
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Cruz, I. F., C. Stroe, F. Caimi, A. Fabiani, C. Pesquita, F. Couto, and M. Palmonari, "Using AgreementMaker to align ontologies for OAEI 2011", Proceedings of the Sixth International Workshop on Ontology Matching, pp. 114–121, 2011.
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Couto, F., T. Grego, C. Pesquita, and P. Verissimo, Handling self-citations using Google Scholar, : International Journal of Scientometrics, Informetrics and Bibliometrics, 2009.
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Pesquita, C., T. Grego, and F. Couto, "Identifying Gene Ontology Areas for Automated Enrichment", Distributed Computing, Artificial Intelligence, Bioinformatics, Soft Computing, and Ambient Assisted Living: Springer, pp. 934–941, 2009.
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Pesquita, C., D. Faria, and F. Couto, "Measuring coherence between electronic and manual annotations in biological databases", Proceedings of the 2009 ACM symposium on Applied Computing: ACM, pp. 806–807, 2009.
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Pesquita, C., D. Faria, A. O. Falcao, P. Lord, and F. Couto, "Semantic similarity in biomedical ontologies", PLoS computational biology, vol. 5, no. 7: Public Library of Science, pp. e1000443, 2009.
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Pesquita, C., D. Faria, T. Grego, F. Couto, and M. J. Silva, "Untangling BioOntologies for Mining Biomedical Information", Handbook of research on text and Web mining technologies: Information Science Reference, 2009.
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Tavares, B., H. Bastos, D. Faria, J. Ferreira, T. Grego, C. Pesquita, and F. Couto, "The Biomedical Ontology Applications (BOA) framework", evaluation, vol. 9, no. S5, pp. S4, 2008.
Bastos, H., C. Pesquita, D. Faria, and A. O. Falcao, "BOLOS: BLAST & Ontology Linked-hOmologue Stars", Proceedings of the 2008 ACM symposium on Applied computing: ACM, pp. 1278–1281, 2008.
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Couto, F., T. Grego, H. Bastos, C. Pesquita, R. Torres, P. Sánchez, L. Pascual, and C. Blaschke, "Identifying bioentity recognition errors of rule-based text-mining systems", Digital Information Management, 2008. ICDIM 2008. Third International Conference on: IEEE, pp. 733–738, 2008.
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Silva, M. J., F. Couto, T. Grego, D. Faria, and C. Pesquita, Untangling BioOntologies for Mining Biomedical Information, : Handbook of Research on Text and Web Mining Technologies, IGI Global Publishing, 2008.
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Bastos, H., D. Faria, C. Pesquita, and A. O. Falcao, "Using GO terms to evaluate protein clustering", BioOntologies SIG at ISMB/ECCB-15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), 2007.