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Falcao, A. O., "Visualization in the Design of Forested Landscapes", Designing Green Landscapes: Springer Netherlands, pp. 245–263, 2008.
Langlois, T., T. Chambel, E. Oliveira, P. Carvalho, G. Marques, and A. O. Falcao, "VIRUS: video information retrieval using subtitles", Proceedings of the 14th International Academic MindTrek Conference: Envisioning Future Media Environments: ACM, pp. 197–200, 2010.
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Bastos, H., D. Faria, C. Pesquita, and A. O. Falcao, "Using GO terms to evaluate protein clustering", BioOntologies SIG at ISMB/ECCB-15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), 2007.
Tome, M., J. G. Borges, and A. O. Falcao, "The use of management-oriented growth and yield models to assess and model forest wood sustainability. A case study for eucalyptus plantations in Portugal", Models for Sustainable Management of Temperate Plantation Forests, European Forest Institute, Joensuu, pp. 81–94, 2001.
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Teixeira, A. L., and A. O. Falcao, "Structural similarity based kriging for quantitative structure activity and property relationship modeling", Journal of chemical information and modeling, vol. 54, no. 7: American Chemical Society, pp. 1833–1849, 2014.
Borges, J. G., J. Garcia-Gonzalo, S. Marques, V. A. Valdebenito, M. E. McDill, and A. O. Falcao, "Strategic Management Scheduling", The Management of Industrial Forest Plantations: Springer Netherlands, pp. 171–238, 2014.
Falcao, A. O., "Simulação e projecção de alternativas de gestão para o montado de sobro", Documento Técnico, vol. 4, no. 02, 2002.
Falcao, A. O., {Simulação e Geração de Alternativas de Gestão para o Per{ímetro Florestal do Cantão das Hortas-Serra da Lousã, , 2002.
Martins, F., A. O. Falcao, and F. Couto, Semantic Similarity Match for Data Quality, : Department of Informatics, University of Lisbon, 2007.
Pesquita, C., D. Faria, A. O. Falcao, P. Lord, and F. Couto, "Semantic similarity in biomedical ontologies", PLoS computational biology, vol. 5, no. 7: Public Library of Science, pp. e1000443, 2009.
Pesquita, C., D. Faria, A. O. Falcao, P. Lord, F. Couto, and , "Semantic Similarities in Biomedical Ontologies", IMIA Yearbook, vol. 5, pp. 84–84, 2010.
Falcao, A. O., JG. Borges, and M. Tomé, "SAGfLOR–An automated forest management prescription writer", Modelling the Growth of Tree Plantations and Agroforestry Systems in South and East Africa, University of Joensuu, Faculty of Forestry Research Notes, vol. 97, pp. 211–218, 1999.
Borges, JG., and A. O. Falcao, "SagFlor, a simulator of management alternatives in forest ecosystems", Revista Florestal (Portugal), 1999.
Falcao, A. O., and JG. Borges, SAGfLOR 2.0-Simulador de Alternativas de Gestão. Manual de Utilização, : Grupo de Economia e Planeamento em Recursos Florestais, Documento nº5, DEF, Lisboa, 1999.
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Canato, S., J. D. Santos, A. S. Carvalho, K. Aloria, M. D. Amaral, R. Matthiesen, A. O. Falcao, and C. M. Farinha, "Proteomic interaction profiling reveals KIFC1 as a factor involved in early targeting of F508del-CFTR to degradation", Cellular and Molecular Life Sciences: Springer, pp. 1–15, 2018.
Faria, D., C. Pesquita, F. Couto, and A. O. Falcao, Proteinon: A web tool for protein semantic similarity, : Department of Informatics, University of Lisbon, 2007.
Borges, JG., and A. O. Falcao, "Programação dinâmica e gestão de povoamentos com estrutura regular e composição pura. Aplicação á Mata Nacional de Leiria", Revista Florestal, vol. 12, no. 1/2, pp. 69–82, 1999.
Eduati, F., L. M. Mangravite, T. Wang, H. Tang, C. J. Bare, R. Huang, T. Norman, M. Kellen, M. P. Menden, J. Yang, et al., "Prediction of human population responses to toxic compounds by a collaborative competition", NATURE BIOTECHNOLOGY, vol. 33, pp. 933-U172, SEP, 2015.
Eduati, F., L. M. Mangravite, T. Wang, H. Tang, C. J. Bare, R. Huang, T. Norman, M. Kellen, M. P. Menden, J. Yang, et al., "Prediction of human population responses to toxic compounds by a collaborative competition", NATURE BIOTECHNOLOGY, vol. 33, pp. 933-U172, SEP, 2015.
Keller, A., R. C. Gerkin, Y. Guan, A. Dhurandhar, G. Turu, B. Szalai, J. D. Mainland, Y. Ihara, C. Wen Yu, R. Wolfinger, et al., "Predicting human olfactory perception from chemical features of odor molecules", Science: American Association for the Advancement of Science, pp. eaal2014, 2017.
Bettinger, P., C. J. Cieszewski, and A. O. Falcao, "Perspectives on New Developments of Decision Support Systems for Sustainable Forest Management", Mathematical and Computational Forestry & Natural-Resource Sciences (MCFNS), vol. 3, no. 1, pp. Pages–15, 2011.
Falcao, A. O., D. Faria, and A. Ferreira, "Peptide programs: applying fragment programs to protein classification", Proceedings of the 2nd international workshop on Data and text mining in bioinformatics: ACM, pp. 37–44, 2008.
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Teixeira, A. L., and A. O. Falcao, "Noncontiguous atom matching structural similarity function", Journal of chemical information and modeling, vol. 53, no. 10: American Chemical Society, pp. 2511–2524, 2013.
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Falcao, A. O., "{Integração de um visualizador interactivo de paisagens florestais num sistema de apoio á decisão em gestão de recursos naturais–aplicação á Serra da Lousã", Silva Lusitana. Nº Especial, pp. 89–102, 2004.
Miragaia, C., JG. Borges, A. O. Falcao, and M. Tome, "InFlor, a management information system in forest resources", Modelling the growth of tree plantations and agroforestry systems in South and East Africa, University of Joensuu, Faculty of Forestry Research Notes, vol. 80, pp. 131–142, 1998.
Falcao, A. O., Implementação de métodos heur{ísticos para modelação da gestão em ecossistemas florestais–Integração num Sistema de Apoio á Decisão, : Ph. D. thesis, Instituto Superior de Agronomia, Lisboa, 2001.
Canato, S., JD. Santos, AS. Carvalho, MD. Amaral, R. Matthiesen, A. Falcao, and CM. Farinha, "IDENTIFICATION OF PROTEIN FACTORS THAT REGULATE CFTR EXIT FROM THE ENDOPLASMIC RETICULUM", PEDIATRIC PULMONOLOGY, vol. 51: WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA, pp. 205–205, 2016.
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Falcao, A. O., T. Langlois, and A. Wichert, "Flexible kernels for RBF networks", Neurocomputing, vol. 69, no. 16: Elsevier, pp. 2356–2359, 2006.
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Pesquita, C., D. Faria, H. Bastos, A. O. Falcao, and F. Couto, "Evaluating GO-based Semantic Similarity Measures. ISMB/ECCB 2007 SIG Meeting Program Materials", International Society for Computational Biology, 2007.
Pesquita, C., D. Faria, H. Bastos, A. O. Falcao, and F. Couto, "Evaluating gobased semantic similarity measures", Proc. 10th Annual Bio-Ontologies Meeting, vol. 2007, pp. 37–40, 2007.
Pesquita, C., D. Faria, H. Bastos, A. O. Falcao, and F. Couto, "Evaluating go-based semantic similarity measures", Proc. 10th Annual Bio-Ontologies Meeting, vol. 37, no. 40, pp. 38, 2007.
Canato, S., J. Santos, A. Carvalho, M. Amaral, R. Matthiesen, A. Falcao, and C. Farinha, "ER quality control protein network in CF to modulate F508del-CFTR rescued", FEBS JOURNAL, vol. 283: WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA, pp. 138–138, 2016.
Faria, D., A. E. N. Ferreira, and A. O. Falcao, "Enzyme classification with peptide programs: a comparative study", BMC bioinformatics, vol. 10, no. 1: BioMed Central Ltd, pp. 231, 2009.
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Bastos, H., C. Pesquita, D. Faria, and A. O. Falcao, "BOLOS: BLAST & Ontology Linked-hOmologue Stars", Proceedings of the 2008 ACM symposium on Applied computing: ACM, pp. 1278–1281, 2008.
Martins, I. Filipa, A. L. Teixeira, L. Pinheiro, and A. O. Falcao, "A Bayesian approach to in silico blood-brain barrier penetration modeling", Journal of chemical information and modeling, vol. 52, no. 6: American Chemical Society, pp. 1686–1697, 2012.