Publications

Export 74 results:
Filters: Author is Falcao, A  [Clear All Filters]
Book
Falcao, A. O., and JG. Borges, SAGfLOR 2.0-Simulador de Alternativas de Gestão. Manual de Utilização, : Grupo de Economia e Planeamento em Recursos Florestais, Documento nº5, DEF, Lisboa, 1999.
Book Chapter
Falcao, A. O., and J. Guilherme Borges, "Comparison of Heuristics for Spatially Constrained Natural Resource Management Problems", Systems Analysis in Forest Resources: Springer Netherlands, pp. 269–277, 2003.
Borges, J. G., A. O. Falcao, C. Miragaia, P. Marques, and M. Marques, "A decision support system for forest ecosystem management in Portugal", Systems Analysis in Forest Resources: Springer Netherlands, pp. 155–163, 2003.
Borges, J. G., H. M. Hoganson, and A. O. Falcao, "Heuristics in multi-objective forest management", Multi-objective forest planning: Springer Netherlands, pp. 119–151, 2002.
Borges, J. G., J. Garcia-Gonzalo, S. Marques, V. A. Valdebenito, M. E. McDill, and A. O. Falcao, "Strategic Management Scheduling", The Management of Industrial Forest Plantations: Springer Netherlands, pp. 171–238, 2014.
Falcao, A. O., "Visualization in the Design of Forested Landscapes", Designing Green Landscapes: Springer Netherlands, pp. 245–263, 2008.
Conference Paper
Bastos, H., C. Pesquita, D. Faria, and A. O. Falcao, "BOLOS: BLAST & Ontology Linked-hOmologue Stars", Proceedings of the 2008 ACM symposium on Applied computing: ACM, pp. 1278–1281, 2008.
Canato, S., J. Santos, A. Carvalho, M. Amaral, R. Matthiesen, A. Falcao, and C. Farinha, "ER quality control protein network in CF to modulate F508del-CFTR rescued", FEBS JOURNAL, vol. 283: WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA, pp. 138–138, 2016.
Canato, S., JD. Santos, AS. Carvalho, MD. Amaral, R. Matthiesen, A. Falcao, and CM. Farinha, "IDENTIFICATION OF PROTEIN FACTORS THAT REGULATE CFTR EXIT FROM THE ENDOPLASMIC RETICULUM", PEDIATRIC PULMONOLOGY, vol. 51: WILEY-BLACKWELL 111 RIVER ST, HOBOKEN 07030-5774, NJ USA, pp. 205–205, 2016.
Canato, S., AS. Carvalho, HM. Botelho, K. Aloria, R. Matthiesen, MD. Amaral, A. Falcao, and CM. Farinha, "Modulation of protein traffic networks to rescue F508del-CFTR from the endoplasmic reticulum", FEBS JOURNAL, vol. 284: WILEY 111 RIVER ST, HOBOKEN 07030-5774, NJ USA, pp. 297–298, 2017.
Falcao, A. O., D. Faria, and A. Ferreira, "Peptide programs: applying fragment programs to protein classification", Proceedings of the 2nd international workshop on Data and text mining in bioinformatics: ACM, pp. 37–44, 2008.
Langlois, T., T. Chambel, E. Oliveira, P. Carvalho, G. Marques, and A. O. Falcao, "VIRUS: video information retrieval using subtitles", Proceedings of the 14th International Academic MindTrek Conference: Envisioning Future Media Environments: ACM, pp. 197–200, 2010.
Duarte, C., L. Carriço, D. Costa, D. Costa, A. O. Falcao, and L. Tavares, "Welcoming gesture recognition into autism therapy", CHI'14 Extended Abstracts on Human Factors in Computing Systems: ACM, pp. 1267–1272, 2014.
Journal Article
Loff, J. F., M. Palahí, A. O. Falcao, H. Martins, and J. G. Borges, "Addressing sustainability concerns in Mediterranean forest ecosystem management", MEDFOREX Program, Forest Technology Centre of Catalonia, pp. 1–9, 2008.
Falcao, A. O., Addressing the computational complexity of harvest scheduling problems for short rotation species: Heuristics or Integer Programming?, : International Conference of Interdisciplinary Mathematical & Statistical Techniques, 2006.
Madureira, L., L. C. Nunes, J. G. Borges, and A. O. Falcao, "Assessing forest management strategies using a contingent valuation approach and advanced visualisation techniques: A Portuguese case study", Journal of Forest Economics, vol. 17, no. 4: Urban & Fischer, pp. 399–414, 2011.
Kausar, S., and A. O. Falcao, "An automated framework for QSAR model building", Journal of cheminformatics, vol. 10, no. 1: Nature Publishing Group, pp. 1, 2018.
Teixeira, A. L., J. P. Leal, and A. O. Falcao, "Automated Identification and Classification of Stereochemistry: Chirality and Double Bond Stereoisomerism", arXiv preprint arXiv:1303.1724, 2013.
Leal, J. P., A. O. Falcao, and A. L. Teixeira, Automated Identification and Classification of Stereochemistry: Chirality and Double Bond Stereoisomerism, , 2013.
Martins, I. Filipa, A. L. Teixeira, L. Pinheiro, and A. O. Falcao, "A Bayesian approach to in silico blood-brain barrier penetration modeling", Journal of chemical information and modeling, vol. 52, no. 6: American Chemical Society, pp. 1686–1697, 2012.
Marques, AF., C. Rosset, J. Rasinmaki, H. Vacik, S. Gordon, S. Nobre, A. O. Falcao, D. Weber, M. Granitzer, and LO. Eriksson, "Collaborative development of a semantic wiki on forest management decision support", Scandinavian Journal of Forest Research, vol. 29, no. sup1: Taylor & Francis, pp. 30–43, 2014.
Falcao, A. O., and J. Borges, "Combining random and systematic search heuristic procedures for solving spatially constrained forest management scheduling models", Forest Science, vol. 48, no. 3: Society of American Foresters, pp. 608–621, 2002.
Cieszewski, C. J., P. Bettinger, and A. O. Falcao, "The Conclusion of Perspectives on New Developments of Decision Support Systems for Sustainable Forest Management", Mathematical and Computational Forestry & Natural-Resource Sciences (MCFNS), vol. 3, no. 2, pp. Pages–73, 2011.
Sieberts, S. K., F. Zhu, J. García-García, E. Stahl, A. Pratap, G. Pandey, D. Pappas, D. Aguilar, B. Anton, J. Bonet, et al., "Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis", Nature communications, vol. 7: Nature Publishing Group, pp. 12460, 2016.
Falcao, A. O., and J. G. Borges, "Designing an evolution program for solving integer forest management scheduling models: an application in Portugal", Forest science, vol. 47, no. 2: Society of American Foresters, pp. 158–168, 2001.
Falcao, A. O., and J. G. Borges, "Designing decision support tools for Mediterranean forest ecosystems management: a case study in Portugal", Annals of Forest Science, vol. 62, no. 7: EDP Sciences, pp. 751–760, 2005.
Falcao, A. O., "DUNAS–A growth model for the National Forest of Leiria", Empirical and process-based models for forest tree and stand growth simulation, pp. 20–26, 1997.
Borges, JG., and A. O. Falcao, "[Dynamic programming and the management of forest plantations with a regular structure and pure composition: its application to the Leiria National Woodlands]", Revista Florestal (Portugal), 1999.
Faria, D., A. E. N. Ferreira, and A. O. Falcao, "Enzyme classification with peptide programs: a comparative study", BMC bioinformatics, vol. 10, no. 1: BioMed Central Ltd, pp. 231, 2009.
Pesquita, C., D. Faria, H. Bastos, A. O. Falcao, and F. Couto, "Evaluating go-based semantic similarity measures", Proc. 10th Annual Bio-Ontologies Meeting, vol. 37, no. 40, pp. 38, 2007.
Pesquita, C., D. Faria, H. Bastos, A. O. Falcao, and F. Couto, "Evaluating gobased semantic similarity measures", Proc. 10th Annual Bio-Ontologies Meeting, vol. 2007, pp. 37–40, 2007.
Pesquita, C., D. Faria, H. Bastos, A. O. Falcao, and F. Couto, "Evaluating GO-based Semantic Similarity Measures. ISMB/ECCB 2007 SIG Meeting Program Materials", International Society for Computational Biology, 2007.
Falcao, A. O., T. Langlois, and A. Wichert, "Flexible kernels for RBF networks", Neurocomputing, vol. 69, no. 16: Elsevier, pp. 2356–2359, 2006.
Siqueira, JM., TA. Paço, JC. Silvestre, FL. Santos, A. O. Falcao, and LS. Pereira, "Generating fuzzy rules by learning from olive tree transpiration measurement–An algorithm to automatize Granier sap flow data analysis", Computers and Electronics in Agriculture, vol. 101: Elsevier, pp. 1–10, 2014.
Tomé, M., A. O. Falcao, A. Carvalho, and A. Amaro, "A global growth model for eucalypt plantations in Portugal", Lesnictvi-UZPI (Czech Republic), 1995.
Tomé, M., A. O. Falcao, and A. Amaro, "Globulus V1. 0.0: A regionalised growth model for Eucalypt plantations in Portugal", Proceedings of the IUFRO Conference: Modelling growth of fast-grown tree species, pp. 138–145, 1997.
Faria, D., C. Pesquita, F. Couto, and A. O. Falcao, "GOclasses: molecular function as viewed by proteins", The 12th Annual Bio-Ontologies, 2009.
Borges, JG., JA. Gomes, A. O. Falcao, and HM. Hoganson, "[Heuristics based on dynamic programming and adjacency restrictions in forest management: an example in a cork-oak grove and its application in a eucalyptus plantation]", Revista Florestal (Portugal), 1999.
Miragaia, C., JG. Borges, A. O. Falcao, and M. Tome, "InFlor, a management information system in forest resources", Modelling the growth of tree plantations and agroforestry systems in South and East Africa, University of Joensuu, Faculty of Forestry Research Notes, vol. 80, pp. 131–142, 1998.
Falcao, A. O., "{Integração de um visualizador interactivo de paisagens florestais num sistema de apoio á decisão em gestão de recursos naturais–aplicação á Serra da Lousã", Silva Lusitana. Nº Especial, pp. 89–102, 2004.
Falcao, A. O., and JG. Borges, "[Linear programming and strategic forest resource management: its application to the Leiria National Woodlands]", Revista Florestal (Portugal), 1999.
Falcao, A. O., and J. Guilherme Borges, "MANAGEMENT PROBLEMS", Managing Forest Ecosystems, pp. 269, 2003.
Pesquita, C., D. Faria, H. Bastos, A. Ferreira, A. O. Falcao, and F. Couto, "Metrics for GO based protein semantic similarity: a systematic evaluation", BMC bioinformatics, vol. 9, no. Suppl 5: BioMed Central Ltd, pp. S4, 2008.
Faria, D., A. Schlicker, C. Pesquita, H. Bastos, A. E. N. Ferreira, M. Albrecht, and A. O. Falcao, "Mining GO annotations for improving annotation consistency", PloS one, vol. 7, no. 7: Public Library of Science, pp. e40519, 2012.
Borges, J. Guilherme, P. Soares, M. Tome, J. Tomé, J. Santos Pereira, S. Barreiro, A. O. Falcao, C. Araújo, J. Pedro Pina, L. Lemos, et al., Modelação da sustentabilidade da produção de madeira e do armazenamento de carbono de eucaliptais ao n{ível da unidade de gestão, : SPCF, 2005.
Zhang, H., M. Constantino, and A. O. Falcao, "Modeling forest core area with integer programming", Annals of Operations Research, vol. 190, no. 1: Springer US, pp. 41–55, 2011.
Teixeira, A. L., and A. O. Falcao, "Noncontiguous atom matching structural similarity function", Journal of chemical information and modeling, vol. 53, no. 10: American Chemical Society, pp. 2511–2524, 2013.
Bettinger, P., C. J. Cieszewski, and A. O. Falcao, "Perspectives on New Developments of Decision Support Systems for Sustainable Forest Management", Mathematical and Computational Forestry & Natural-Resource Sciences (MCFNS), vol. 3, no. 1, pp. Pages–15, 2011.
Keller, A., R. C. Gerkin, Y. Guan, A. Dhurandhar, G. Turu, B. Szalai, J. D. Mainland, Y. Ihara, C. Wen Yu, R. Wolfinger, et al., "Predicting human olfactory perception from chemical features of odor molecules", Science: American Association for the Advancement of Science, pp. eaal2014, 2017.
Eduati, F., L. M. Mangravite, T. Wang, H. Tang, C. J. Bare, R. Huang, T. Norman, M. Kellen, M. P. Menden, J. Yang, et al., "Prediction of human population responses to toxic compounds by a collaborative competition", NATURE BIOTECHNOLOGY, vol. 33, pp. 933-U172, SEP, 2015.
Eduati, F., L. M. Mangravite, T. Wang, H. Tang, C. J. Bare, R. Huang, T. Norman, M. Kellen, M. P. Menden, J. Yang, et al., "Prediction of human population responses to toxic compounds by a collaborative competition", NATURE BIOTECHNOLOGY, vol. 33, pp. 933-U172, SEP, 2015.
Borges, JG., and A. O. Falcao, "Programação dinâmica e gestão de povoamentos com estrutura regular e composição pura. Aplicação á Mata Nacional de Leiria", Revista Florestal, vol. 12, no. 1/2, pp. 69–82, 1999.
Faria, D., C. Pesquita, F. Couto, and A. O. Falcao, Proteinon: A web tool for protein semantic similarity, : Department of Informatics, University of Lisbon, 2007.
Canato, S., J. D. Santos, A. S. Carvalho, K. Aloria, M. D. Amaral, R. Matthiesen, A. O. Falcao, and C. M. Farinha, "Proteomic interaction profiling reveals KIFC1 as a factor involved in early targeting of F508del-CFTR to degradation", Cellular and Molecular Life Sciences: Springer, pp. 1–15, 2018.
Teixeira, A. L., J. P. Leal, and A. O. Falcao, "Random forests for feature selection in QSPR Models-an application for predicting standard enthalpy of formation of hydrocarbons.", J. Cheminformatics, vol. 5, pp. 9, 2013.
Falcao, A. O., M. Próspero Santos, and J. G. Borges, "A real-time visualization tool for forest ecosystem management decision support", Computers and electronics in agriculture, vol. 53, no. 1: Elsevier, pp. 3–12, 2006.
Falcao, A. O., and M. Próspero Santos, Representação de Paisagens Florestais Adequada á Navegação para Áreas de Grande Dimensão, , 2004.
Falcao, A. O., "Residue fragment programs for enzyme classification", Proceedings of the workshop Bioinformatics: Knowledge Discovery in Biology, pp. 24–28, 2005.
Teles, J., J. Cavaleiro, P. Weinman, A. O. Falcao, P. Fernandes, and JE. Fonseca, RheugulationDB: building an integrated view on Rheumatoid Artritis, : European Congress of Rheumatology, 2006.
Teles, J., J. Cavaleiro, P. Weinman, A. O. Falcao, P. Fernandes, and JE. Fonseca, RheugulationDB: Construindo uma imagem integrada para a artrite reumatóide, : XIII Congresso Português de Reumatologia, 2006.
Borges, JG., and A. O. Falcao, "SagFlor, a simulator of management alternatives in forest ecosystems", Revista Florestal (Portugal), 1999.
Falcao, A. O., JG. Borges, and M. Tomé, "SAGfLOR–An automated forest management prescription writer", Modelling the Growth of Tree Plantations and Agroforestry Systems in South and East Africa, University of Joensuu, Faculty of Forestry Research Notes, vol. 97, pp. 211–218, 1999.
Pesquita, C., D. Faria, A. O. Falcao, P. Lord, F. Couto, and , "Semantic Similarities in Biomedical Ontologies", IMIA Yearbook, vol. 5, pp. 84–84, 2010.
Pesquita, C., D. Faria, A. O. Falcao, P. Lord, and F. Couto, "Semantic similarity in biomedical ontologies", PLoS computational biology, vol. 5, no. 7: Public Library of Science, pp. e1000443, 2009.
Martins, F., A. O. Falcao, and F. Couto, Semantic Similarity Match for Data Quality, : Department of Informatics, University of Lisbon, 2007.
Falcao, A. O., {Simulação e Geração de Alternativas de Gestão para o Per{ímetro Florestal do Cantão das Hortas-Serra da Lousã, , 2002.
Falcao, A. O., "Simulação e projecção de alternativas de gestão para o montado de sobro", Documento Técnico, vol. 4, no. 02, 2002.
Teixeira, A. L., and A. O. Falcao, "Structural similarity based kriging for quantitative structure activity and property relationship modeling", Journal of chemical information and modeling, vol. 54, no. 7: American Chemical Society, pp. 1833–1849, 2014.
Teixeira, A. L., R. C. Santos, J. P. Leal, J. A. Martinho Simões, and A. O. Falcao, "ThermInfo: Collecting, Retrieving, and Estimating Reliable Thermochemical Data", arXiv preprint arXiv:1302.0710, 2013.
Clarke, L. A., H. M. Botelho, L. Sousa, A. O. Falcao, and M. D. Amaral, "Transcriptome meta-analysis reveals common differential and global gene expression profiles in cystic fibrosis and other respiratory disorders and identifies CFTR regulators", GENOMICS, vol. 106, pp. 268-277, NOV, 2015.
Tome, M., J. G. Borges, and A. O. Falcao, "The use of management-oriented growth and yield models to assess and model forest wood sustainability. A case study for eucalyptus plantations in Portugal", Models for Sustainable Management of Temperate Plantation Forests, European Forest Institute, Joensuu, pp. 81–94, 2001.
Bastos, H., D. Faria, C. Pesquita, and A. O. Falcao, "Using GO terms to evaluate protein clustering", BioOntologies SIG at ISMB/ECCB-15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB), 2007.
Canato, S., AS. Carvalho, HM. Botelho, K. Aloria, R. Matthiesen, MD. Amaral, A. Falcao, and CM. Farinha, "WS09. 2 Modulation of protein traffic networks to rescue F508del-CFTR from the endoplasmic reticulum", Journal of Cystic Fibrosis, vol. 16: Elsevier, pp. S16, 2017.