Publications

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Barron, P., Biegel G., Cahill V., Casimiro A., Clarke S., Cunningham R., et al. (2003).  Preliminary definition of CORTEX programming model.
Barros, M., Couto F. M., & (2016).  Knowledge Representation and Management: a linked data perspective. IMIA Yearbook. 178–183.
Barros, M., Lamurias A., Figueiró G., Antunes M., Teixeira J., Pinheiro A., et al. (2016).  ULISBOA at SemEval-2016 Task 12: Extraction of temporal expressions, clinical events and relations using IBEnt.. SemEval@ NAACL-HLT. 1263–1267.
Barth, D., Bournez O., Boussaton O., & Cohen J. (2009).  Apprentissage distribué d'états stables pour le routage. ROADEF 2009. 259.
Bartoletti, M., Castellani I., Deniélou P-M., Dezani-ciancaglini M., Ghilezan S., Pantović J., et al. (2014).  BETTY WG2 State of the art report.
Bartolomeu, P., Ferreira J., & Fonseca J. (2009).  Enforcing flexibility in real-time wireless communications: A bandjacking enabled protocol. Emerging Technologies & Factory Automation, 2009. ETFA 2009. IEEE Conference on. 1–4.
Bastos, H., Faria D., Pesquita C., & Falcao A. O. (2007).  Using GO terms to evaluate protein clustering. BioOntologies SIG at ISMB/ECCB-15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB).
Bastos, H., Grego T., Couto F., & Coutinho P. M. (2009).  Enzyme family coherence assessment: validation and prediction.
Bastos, H. P., Sousa L., Clarke L. A., & Couto F. M. (2016).  Functional coherence metrics in protein families. Journal of biomedical semantics. 7, 41.
Bastos, H., Tavares B., Pesquita C., Faria D., & Couto F. (2011).  Application of Gene Ontology to gene identification. In Silico Tools for Gene Discovery. 141–157.
Bastos, H., Clarke L. A., & Couto F. (2013).  Annotation extension through protein family annotation coherence metrics. Frontiers in genetics. 4,
Bastos, H., Sousa L.., Clarke L.., & Couto F. (2015).  GRYFUN: A Web Application for GO Term Annotation Visualization and Analysis in Protein Sets. PLoS ONE. 10, 1-20.
Bastos, H., Tavares B., Pesquita C., Faria D., & Couto F. (2011).  Application of gene ontology to gene identification.. Methods in molecular biology (Clifton, NJ). 760, 141–157.
Bastos, H., Pesquita C., Faria D., & Falcao A. O. (2008).  BOLOS: BLAST & Ontology Linked-hOmologue Stars. Proceedings of the 2008 ACM symposium on Applied computing. 1278–1281.
Batista, P., & Silva M. J. (2002).  Mining web access logs of an on-line newspaper. the proceedings of 12th International Meeting of the Euro Working Group on Decision Support Systems.
Batista, P., & Silva M. J. (2003).  Mining Web Access Logs of an On-line Newspaper. 2002.
Batista, P., & Silva M. J. (2000).  Prospecção dos Dados de Acesso ao Público On-Line.
Batista, D. S., Ferreira J., Couto F., & Silva M. J. (2012).  Toponym disambiguation using ontology-based semantic similarity. Computational Processing of the Portuguese Language. 179–185.
Batista, D. S., & Silva M. J. (2010).  A statistical study of the WPT05 crawl of the Portuguese Web. FALA 2010 VI Jornadas en Tecnolog{ía del Habla and II Iberian SLTech Workshop, Vigo, Spain.
Batista, P., & Silva M. J. (2002).  Mining on-line newspaper web access logs. Proceedings of the AH'2002 Workshop on Recommendation and Personalization in eCommerce. 100–108.
Batista, P., & Silva M. J. (2001).  Web access mining from an on-line newspaper logs.
Batista, D. S., Silva M. J., Couto F., & Behera B. (2010).  Geographic signatures for semantic retrieval. Proceedings of the 6th Workshop on Geographic Information Retrieval. 19.
Batista, P., & Silva M. J. (1999).  Prospecção dos Dados de Acesso a um Servidor de Noticias Web.
Bellovin, S. M., Benzel T. V., Blakley B., Denning D. E., Diffie W., Epstein J., et al. (2008).  Information assurance technology forecast 2008. IEEE Security & Privacy. 16–23.
Berman, E., Hajdu E., Muricy GR. da S., Lavrado HP., Cardoso IA., Verissimo I., et al. (2006).  Benthic biodiversity of the central region of the Brazilian Economic Exclusion Zone.. Biodiversidade bentônica da região central da Zona Econômica Exclusiva brasileira.

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